CDS

Accession Number TCMCG007C58617
gbkey CDS
Protein Id XP_033136947.1
Location complement(join(40849041..40849142,40849224..40849295,40849635..40849706,40849802..40850023,40850100..40850192,40850282..40850374,40850463..40850549,40850636..40850668,40850963..40851057,40851165..40851249,40851356..40851442,40851535..40851631,40851746..40851993,40852114..40852191,40852310..40852390,40852473..40852520,40852583..40852823,40852901..40853028))
Gene LOC103842713
GeneID 103842713
Organism Brassica rapa

Protein

Length 653aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_033281056.1
Definition probable threonine--tRNA ligase, cytoplasmic isoform X1 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category J
Description threonine--tRNA ligase
KEGG_TC -
KEGG_Module M00359        [VIEW IN KEGG]
M00360        [VIEW IN KEGG]
KEGG_Reaction R03663        [VIEW IN KEGG]
KEGG_rclass RC00055        [VIEW IN KEGG]
RC00523        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko01007        [VIEW IN KEGG]
ko03016        [VIEW IN KEGG]
KEGG_ko ko:K01868        [VIEW IN KEGG]
EC 6.1.1.3        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00970        [VIEW IN KEGG]
map00970        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004812        [VIEW IN EMBL-EBI]
GO:0004829        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006082        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006399        [VIEW IN EMBL-EBI]
GO:0006412        [VIEW IN EMBL-EBI]
GO:0006418        [VIEW IN EMBL-EBI]
GO:0006435        [VIEW IN EMBL-EBI]
GO:0006518        [VIEW IN EMBL-EBI]
GO:0006520        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016874        [VIEW IN EMBL-EBI]
GO:0016875        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019752        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0043038        [VIEW IN EMBL-EBI]
GO:0043039        [VIEW IN EMBL-EBI]
GO:0043043        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043436        [VIEW IN EMBL-EBI]
GO:0043603        [VIEW IN EMBL-EBI]
GO:0043604        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:0140101        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGGATGAACATCCCAGGGACGAGGCTTATCTCTCAGCCGTCATCGAGAAGCGTATCAGGCTCTTCGAGGAGTTCCAAGCGAAGCAGCTCGCGGAGATTCAGTCTCGGCCACACGAGCCGATCAAGGTTACAATTCGAGATGGTGGAAACGTGAAAGAAGGGAAGAGATGGGAGACGACTCCAGCAGAAATCGCGAGGCAAATTTCTGTGGGATTGGCAAACTCAGCGCTGATCTCTTCGGTAAACGATGTCCTCTGGGACATGAATAGGCCACTGGAAGCTGATTGTTCGCTTGAGTTTTTCAGTTTTGACAGCGACAAAGGCCGTGATACTTTCTGGCGTTCTAGCGCTCACATTCTCGCCCTGGAGTATGGTTGTAAGCTGTGCGTTGGACCCTGCAAAGCTAGAGATGAGGGTTTCTTCTACGATGCATTCTATGGCGATCTGGGTTTAAACGAGCAACACTTTCCCGAAACTGAAGCAGGGGATGCTCGAGAAGGACATCCATTTGAAAGGATTGAAGTGACCAGGGGTCAGGCTCTTGAGATGTTTCCTGATGATAATACTTTTAAGGCTGAACTCCTCACCGAGGACAAAACCACCGTCTACAGGTGTGGTCCTTTGGTTGATCTGTGTAGTGGACCACATATACCAAATACTTCCTTTGTGAAAGCTTTCAAGTGTTTGAATGTGAGATTCCTACTTTTTATCTACAAGCTACAATTTCTTTTCTTATGCTCACCTAGTCTTTTTTCTCCCACTCAGTTGCTTTCGGTGCTATTAGGCCACCATCACCAACTTTTCTTTTGTCACCCACTCAGCCCTGGGAGTTGGTTCTTCGAGAAACATGGTACTCGCGTATATAATAAGCTGATGCATTTCATCGGGAATGAATATCGGAAAAGGGGCTACGAAGAGGTTATTTCACCAAATATTTACAACATGAAACTCTGGGAAACATCCGGACATGCTGCAAACTACAAGGAAAATATGTACACGTTTGATATTGATAAACAAGAGTTTGGGCTCAAACCTATGAACTGCCCTGGTCACTGCTTGATGTTCCAACACAGGCTTCGCTCGTATAAAGAATTACCCATTAGACTTGCCGACTTTGGAGTGTTACATCGAAATGAGGCAAGTGAAGCTCTTAGTGGCTTGACCCATACCCGACGGTTCCAACAGGATGATGCACACATATTCTGTACAAAGGATCAGGTTAGTGGAGAATTGAAACGTGCATTGGAATTCGTTGACTATGTTTACACAAAATTTGGGTTTACCTATGAGCTAAAGCTCTCAACGAGACCAGAGAAGTACCTTGGAGACTTAACAACATGGGATAGAGCTGAAAGGGACCTTGAAGAAGCACTAGAAGATTTTGGAAAGCCATTCCTTGTGAACAGAGGAGCCGGGGAATTTTATGGCCCGAAGATAGACATAACAGTATCTGATGCAATGAAAAGCTACGTCCAGTGCGCTACTTTGCAACTTGATTTTCAACTTCCTGCCCTCTTCGAGCTGGAATACACAGCTATGGCTGAAGGGAGTTCGGATACACCTGTGATGATACATAGAGCGGTGTTAGGCTCTGTTGAGCGTATGTTTACCACATTGGTGGAGCATTACAAAGGAAAATGGCCCTTCTGGCTTAGTCCGCGCCAGGCCATAGTCTGCTCACTGTCAAAGGATTCTCATGAATACGCTGAAAAGGTGAGAGAACAAATTCATGAAGCTGGGTACTATGTTGATGTTGACATAACAGACAGAAACATCAGCAAGAAGGTGCGAGAAGCTCAGGTTGCGCAGTACAACTACATACTGGTTGTGGGTGCTGAAGAAACTACAACGGGACATGTGACTGTTCGGCGAAGAAACGAAGACCTTTCAGAGTTCCCAGTGCTGAGCGTCGAGAATCTGCTGGATGAATTCAAACTCAAGACGGCCAACTTTCTCTGA
Protein:  
MADEHPRDEAYLSAVIEKRIRLFEEFQAKQLAEIQSRPHEPIKVTIRDGGNVKEGKRWETTPAEIARQISVGLANSALISSVNDVLWDMNRPLEADCSLEFFSFDSDKGRDTFWRSSAHILALEYGCKLCVGPCKARDEGFFYDAFYGDLGLNEQHFPETEAGDAREGHPFERIEVTRGQALEMFPDDNTFKAELLTEDKTTVYRCGPLVDLCSGPHIPNTSFVKAFKCLNVRFLLFIYKLQFLFLCSPSLFSPTQLLSVLLGHHHQLFFCHPLSPGSWFFEKHGTRVYNKLMHFIGNEYRKRGYEEVISPNIYNMKLWETSGHAANYKENMYTFDIDKQEFGLKPMNCPGHCLMFQHRLRSYKELPIRLADFGVLHRNEASEALSGLTHTRRFQQDDAHIFCTKDQVSGELKRALEFVDYVYTKFGFTYELKLSTRPEKYLGDLTTWDRAERDLEEALEDFGKPFLVNRGAGEFYGPKIDITVSDAMKSYVQCATLQLDFQLPALFELEYTAMAEGSSDTPVMIHRAVLGSVERMFTTLVEHYKGKWPFWLSPRQAIVCSLSKDSHEYAEKVREQIHEAGYYVDVDITDRNISKKVREAQVAQYNYILVVGAEETTTGHVTVRRRNEDLSEFPVLSVENLLDEFKLKTANFL